LncRNA Gene

ZFLNCG01702

Basic Information

Chromesome: chr3

Start: 23985397

End: 23987449

Transcript: ZFLNCT02497

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR658541 6 somite normal 42.12
SRR658545 6 somite Gata6 morphant 39.47
SRR658533 bud normal 33.51
SRR658547 6 somite Gata5/6 morphant 30.85
SRR1035981 13 hpf rx3+/+ or rx3+/- 28.60
SRR658537 bud Gata6 morphant 28.46
SRR658535 bud Gata5 morphant 28.43
SRR797914 embryo pbx2/4-MO 26.23
SRR658543 6 somite Gata5 morphan 25.71
SRR1035978 13 hpf rx3-/- 24.45
Express in tissues
Correlated coding gene Download
gene correlation coefficent
hoxc6b 0.78
hoxb9a 0.76
hoxb1b 0.75
hoxb7a 0.75
hoxb10a 0.74
hoxc8a 0.73
hoxa9b 0.73
myf5 0.72
hoxb6a 0.72
hoxd9a 0.71
Gene Ontology Download
GO P value
GO:0055001 1.58e-11
GO:0061061 1.67e-11
GO:0007517 5.27e-11
GO:0007275 5.63e-11
GO:0030154 7.42e-11
GO:0006351 7.67e-11
GO:0097659 7.67e-11
GO:0032774 8.85e-11
GO:0034645 9.05e-11
GO:0048869 9.86e-11
GO:0043231 2.19e-10
GO:0043226 2.44e-10
GO:0005634 2.57e-10
GO:0043229 2.81e-10
GO:0044424 3.37e-10
GO:0043227 3.51e-10
GO:0044425 1.44e-08
GO:0016020 2.21e-08
GO:0044464 6.21e-08
GO:0031224 2.81e-07
GO:0043565 1.02e-10
GO:0003676 1.88e-10
GO:0001071 1.89e-10
GO:0003700 1.89e-10
GO:0003677 2.07e-10
GO:1901363 2.84e-10
GO:0097159 3.28e-10
GO:0005488 3.02e-09
GO:0046983 2.05e-05
GO:0005506 3.24e-05
KEGG Pathway Download
KO P value
ko05217 5.76e-08
ko03030 8.27e-08
ko05205 3.44e-06
ko04340 5.48e-06
ko04950 1.46e-05
ko03008 8.87e-05
ko05200 2.36e-04
ko04975 4.56e-04
ko04144 7.46e-04
ko04612 1.70e-03
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT02497 ENSMUST00000140952; NONMMUT085710; Direct blastn
ZFLNCT02497 ENST00000513533; ENST00000481995; ENST00000548801; ENST00000518046; ENST00000518088; ENST00000613383; ENST00000523364; ENST00000429755; ENST00000467897; ENST00000508688; ENST00000613939; ENST00000512427; ENST00000620092; ENST00000616712; ENST00000617934; ENST00000425358; ENST00000521197; ENST00000615604; ENST00000521231; ENST00000464382; ENST00000602610; ENST00000523790; ENST00000518848; ENST00000622675; ENST00000619974; ENST00000434063; ENST00000479766; ENST00000465846; ENST00000466037; ENST00000517635; ENST00000524304; ENST00000492897; ENST00000520395; ENST00000460041; ENST00000426965; ENST00000523331; ENST00000480872; ENST00000505700; ENST00000593300; ENST00000521159; ENST00000520360; ENST00000440016; ENST00000619311; ENST00000519935; ENST00000477144; ENST00000518947; ENST00000428939; ENST00000435312; ENST00000512206; ENST00000521687; ENST00000524048; ENST00000474040; ENST00000517641; ENST00000502764; ENST00000491264; ENST00000429611; ENST00000474324; ENST00000562848; ENST00000498652; ENST00000604081; ENST00000467155; ENST00000519694; ENST00000517550; ENST00000476204; ENST00000593438; ENST00000522863; ENST00000495032; ENST00000494420; ENST00000522193; ENST00000487849; ENST00000504972; ENST00000620211; ENST00000522674; ENST00000620901; rna51652; rna110526; rna110525; rna110524; rna51647; rna110493; rna51650; rna84770; rna110528; rna51632; rna110538; rna51645; rna20444; rna84771; rna51633; rna110530; rna110537; rna51654; rna110529; NONHSAT054421; NONHSAT075627; NONHSAT211837; NONHSAT028528; NONHSAT119677; NONHSAT119697; NONHSAT183137; NONHSAT119670; NONHSAT175307; NONHSAT119672; NONHSAT119682; NONHSAT054434; NONHSAT119698; NONHSAT028529; NONHSAT175305; NONHSAT119702; NONHSAT119704; NONHSAT054411; NONHSAT119680; NONHSAT119706; NONHSAT054437; NONHSAT054405; NONHSAT211840; NONHSAT119687; NONHSAT119664; NONHSAT211839; NONHSAT211844; NONHSAT054435; NONHSAT054444; NONHSAT028530; NONHSAT054450; NONHSAT054401; NONHSAT119711; NONHSAT119684; NONHSAT119665; NONHSAT211838; NONHSAT185938; NONHSAT119675; NONHSAT054441; NONHSAT185937; NONHSAT119678; NONHSAT054449; NONHSAT119667; NONHSAT175306; NONHSAT119669; NONHSAT119673; NONHSAT054406; NONHSAT054433; NONHSAT211835; NONHSAT054403; NONHSAT211834; NONHSAT213318; NONHSAT175303; NONHSAT119693; NONHSAT119683; NONHSAT119703; NONHSAT054442; NONHSAT075630; NONHSAT054443; NONHSAT119705; NONHSAT054446; NONHSAT028539; NONHSAT160199; NONHSAT028527; NONHSAT119688; NONHSAT119700; NONHSAT119710; NONHSAT175308; NONHSAT211842; NONHSAT119708; NONHSAT211843; NONHSAT211836; NONHSAT028531; NONHSAT163581; NONHSAT054427; NONHSAT054408; NONHSAT054431; NONHSAT163582; NONHSAT119709; NONHSAT175304; NONHSAT119674; NONHSAT028541; NONHSAT119696; NONHSAT054407; NONHSAT213319; NONHSAT054454; NONHSAT119685; NONHSAT119690; NONHSAT119668; NONHSAT119676; NONHSAT054432; NONHSAT211841; NONHSAT119666; NONHSAT119707; ENSMUST00000183562; ENSMUST00000150698; ENSMUST00000185194; ENSMUST00000191326; ENSMUST00000136302; ENSMUST00000134512; ENSMUST00000185090; ENSMUST00000126966; ENSMUST00000184301; ENSMUST00000137729; ENSMUST00000131502; ENSMUST00000184566; ENSMUST00000190845; ENSMUST00000191453; ENSMUST00000145799; ENSMUST00000132326; ENSMUST00000152027; ENSMUST00000184104; ENSMUST00000200824; ENSMUST00000100000; ENSMUST00000156515; ENSMUST00000140952; ENSMUST00000156342; ENSMUST00000147174; ENSMUST00000139005; ENSMUST00000141850; ENSMUST00000184302; ENSMUST00000154027; rna35395; rna35407; rna35414; rna10234; rna35403; rna10228; NONMMUT085706; NONMMUT037975; NONMMUT056965; NONMMUT037980; NONMMUT056968; NONMMUT037983; NONMMUT056957; NONMMUT056950; NONMMUT056969; NONMMUT085709; NONMMUT037973; NONMMUT037974; NONMMUT122276; NONMMUT037979; NONMMUT037976; NONMMUT056966; NONMMUT056970; NONMMUT011703; NONMMUT056953; NONMMUT056971; NONMMUT037977; NONMMUT056955; NONMMUT085710; NONMMUT085707; NONMMUT122275; NONMMUT011705; NONMMUT038965; NONMMUT107327; NONMMUT037978; NONMMUT056952; NONMMUT011706; NONMMUT056954; NONMMUT056959; NONMMUT109225; NONMMUT085708; NONMMUT109226; NONMMUT037982; NONMMUT011701; NONMMUT056960; NONMMUT056967; NONMMUT056961; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG01702
CTCAAAAGCGGCCCCCATTTGTCGACAGTCTGCTGGAAACGGAAATGCAGGGACAGCATAAAGTCACTGA
CCGTGCATGGGCAAGGTTGTGAAAGTCTAGTTAGATTTTTTTTCCTTTAAACCTGCAGCTAAAAAGATGG
ATATTTTACGAAGGTGGCTTCTTTATCTAAATGGATAGATGAACACTTCAGCGCTTATGTGTACGGGAAC
TAACTAGATCCTGTTGTTGACTTTGGTCATGTTTAGAAGGAAGTCTGAACGCCAGAGCTCCATTAGAGTC
ACGGGAGAGTGCAAGCCAGAGAATACACGTACAGCAGGGGTATTTGTGTACTATAAATTTGCTTTTGTAT
TACATTCCTCTTTCATATTTAAATTGCATTTTTATCTTGTAAAGTTTTGATTTTGTTTGGCTTATGTCTC
TTAATCGTAATGCATGCAATAGAGTTAAAACGGTTGCGTAAATTGCTTGTGTTGTTGCAAACTGCAAGAT
TTGGGTAATTTATTATTCCATTTATTTTACTAAAGTTTATGTAATCCCACAGTAAGAAATACGTTTGCAA
AAATAATTTAAAAATGTAAAAATTATAATTAAGACGGGCACTGCTTTATTTCGGATAGGCACAGTGCAAA
AGAAGAACAACAAGAAAACACGAATTAATCGTATCTCATATTTAAAGTCACTAATCGTAATCTAAATAAA
ATGTATCTAAAAAATAAAATTGTAAATATTATAATCAAGGCGGCCACTGCTTTATTTCTGATAGCCAATG
TGCAAATAAGCAGACAAAAAGAAAACACTAATAAATCGTATCTCATATTTACAATCACTAATCGTAATCT
CTAAAAATGTCTTTATAATCCCTGGGACAATAAAACAAATACAATATAAGTCATTAATACACCTATAAGA
ATTAAGCCTAATGCCTTTTGACAAATACAATAGCTACATATAGGCTAGGGCCTACTGGAAATGTTCTTTT
TTTTGTTCATTTTCTTTAGCTTTGCTTAAGTTATATCAGTAATTATATCATATTCGATGATTTTAACAAA
TCAGTAATTTTTGAAAACCAGTGTCCTAAATCAGAATTTACATTATGACTGGTTTGATTTTAACTATCGA
AAAATATATGAGCGTTTCTCAATATTTATTTTCCTTACTAGTTTTGCTGGCATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATTTTTTTTTTTTAATCAAGTGTTATGCTTTCTGAACCTCATT
CTGCGCTTTTCACAGGTGCTGACCGGAAAAGAGGCCGTCAGACCTATTCCCGCTACCAAACATTAGAGCT
GGAGAAAGAGTTTCACTTCAACCGTTACCTTTCAAGACGGCGGCGTATCGAGATAGCACACGCCCTGTGC
TTAACCGAGCGCCAGATCAAAATTTGGTTTCAAAACAGGAGAATGAAATGGAAGAAAGAGAACAAATCAA
CGGACCGCTGCTCGCCTGCTGCTGATCAAATTGGAGGCGACGAGGAAGAAGAAGATGATGAGTAGCAACG
CAAGTTGAAGACATAATAAGACTATACTAAAATATTATTGATTTGACTTGCTTTAATTCGGGATACACTG
AATAAAAAAGTTGATACTTACAATACTGTAGGCAACGTGTCTTTATCGTCTATGTAACTTATGTTAGAGA
TGTTAATGTGCTAAACTATTAAATATAATACTACGAACTATTTTAAAACATTTTAATATAGATGTATAAA
CTACATTTAAGACGTGAATACTAATACTGTATAATAGCCTAAATTCCTTATATATAGGCACAATACTATA
TTATTAACATATGTTTCATAGCATTTGTGAATCTTGTATGTGTGACCTATTATTCGTTCGGTCTATTATC
CACTGAGATCAAACAAAGAAGGGAGCAAGCTACTTTTAATTATTTCGAATTTTGATATACCCCTTTTCTG
TATTTTTGTGTAAATATTTGTC