sample tissue condition fpkm SRR658533 bud normal 1000.08 SRR1035978 13 hpf rx3-/- 831.525 SRR658539 bud Gata5/6 morphant 830.574 SRR1035981 13 hpf rx3+/+ or rx3+/- 810.688 SRR658545 6 somite Gata6 morphant 775.3439999999999 SRR658535 bud Gata5 morphant 684.6210000000001 SRR658541 6 somite normal 638.874 SRR797908 embryo normal 607.955 SRR658537 bud Gata6 morphant 568.909 SRR797911 embryo prdm1-/- 565.6669999999999 SRR797917 embryo pbx2/4-MO and prdm1-/- 540.121 SRR1035984 13 hpf normal 530.42 SRR800045 muscle normal 517.235 SRR797914 embryo pbx2/4-MO 505.168 SRR658547 6 somite Gata5/6 morphant 504.17 SRR891504 liver normal 501.17400000000004 SRR658543 6 somite Gata5 morphan 433.827 SRR1021213 sphere stage normal 425.913 SRR1569491 embryo normal 425.784 SRR527832 16-36 hpf normal 413.714 SRR800046 sphere stage 5azaCyD treatment 405.25699999999995 SRR1569495 embryo normal 381.36300000000006 SRR1021215 sphere stage Mzeomesa 347.406 SRR527840 24hpf normal 315.045 SRR749514 24 hpf normal 297.927 SRR038625 embryo traf6 morpholino 295.202 SRR1004787 larvae impdh1a morpholino 291.51599999999996 SRR514030 retina id2a morpholino 272.482 SRR1104059 heart kctd10 mut 265.096 SRR800049 sphere stage control treatment 258.259 SRR700537 heart Gata4 morpholino 257.909 SRR1104058 heart normal 249.15900000000002 SRR594771 endothelium normal 248.74 SRR749515 24 hpf eif3ha morphant 246.579 SRR1035239 liver transgenic mCherry control 244.90200000000002 SRR372796 bud normal 242.217 SRR633544 larvae exposed to cold stress 238.732 SRR748491 germ ring normal 227.94400000000002 SRR594769 blood normal 226.99200000000002 SRR038624 embryo traf6 morpholino and bacterial infection 222.24599999999998 SRR1004786 larvae control morpholino 220.729 SRR1647681 head kidney SVCV treatment 215.63400000000001 SRR038626 embryo control morpholino and bacterial infection 211.541 SRR800043 sphere stage normal 210.43 SRR700534 heart control morpholino 204.023 SRR1004785 larvae normal 194.237 SRR1039573 gastrointestinal diet 0.75 NPM 185.764 SRR038627 embryo control morpholino 184.197 SRR1647680 head kidney SVCV treatment 183.24 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 182.50099999999998 SRR1004789 larvae impdh2 morpholino 179.16299999999998 SRR1035237 liver transgenic UHRF1 177.695 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 171.019 SRR1647679 head kidney normal 163.782 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 163.076 SRR1004788 larvae impdh1b morpholino 157.67 SRR527844 24hpf normal 151.613 SRR1205154 5dpf transgenic sqET20 149.148 SRR519752 7 dpf VD3 treatment 148.999 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 147.905 SRR891512 blood normal 146.018 SRR535986 larvae nhsl1b mut 144.418 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 143.981 SRR519732 7 dpf FETOH treatment 143.361 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 141.80200000000002 SRR527835 tail normal 138.524 SRR1188160 embryo Insulin 4 hpi 136.516 SRR1291414 5 dpi normal 132.79399999999998 SRR1188152 embryo Insulin 0.5 hpi 132.639 SRR065196 3 dpf normal 129.355 SRR1039571 gastrointestinal diet 0.1 NPM 127.677 SRR535978 larvae normal 126.811 SRR801556 embryo RPS19 and p53 morpholino 124.92399999999999 SRR1188156 embryo Control PBS 4 hpi 123.95 SRR065197 3 dpf U1C knockout 123.01 SRR1647683 spleen SVCV treatment 119.137 SRR1188148 embryo Control PBS 0.5 hpi 117.601 SRR726542 5 dpf infection with control 116.72399999999999 SRR1647684 spleen SVCV treatment 113.539 SRR1291417 5 dpi injected marinum 113.147 SRR1523214 embryo glut12 morpholino 112.87200000000001 SRR519747 6 dpf VD3 treatment 110.936 SRR891510 muscle normal 109.30799999999999 SRR726541 5 dpf infection with Mycobacterium marinum 106.238 SRR610740 3 dpf normal 106.17200000000001 SRR516130 skin male and 5 month 103.18 SRR1205160 5dpf transgenic sqET20 and GFP+ 102.869 SRR519737 2 dpf VD3 treatment 100.57 SRR941753 posterior pectoral fin normal 99.0158 SRR519717 2 dpf FETOH treatment 97.8273 SRR1647682 spleen normal 96.8866 SRR527833 5 dpf normal 93.9146 SRR633550 larvae exposed to hypoxia stress 92.6594 SRR610741 3 dpf express Ras 90.9322 SRR535926 larvae normal 90.4585 SRR519742 4 dpf VD3 treatment 89.6497 SRR519727 6 dpf FETOH treatment 89.0808 SRR1523211 embryo control morpholino 88.9322 SRR633516 larvae normal 86.69200000000001 SRR535943 larvae vangl mut 86.1913 SRR527836 24hpf normal 84.749 SRR610742 3 dpf express NICD 83.6632 SRR891495 heart normal 83.3167 SRR941749 anterior pectoral fin normal 83.086 SRR516121 skin male and 3.5 year 82.9544 SRR516127 skin male and 5 month 82.3569 SRR514028 retina control morpholino 81.7201 SRR748490 1 kcell normal 79.67699999999999 SRR535913 larvae krox mut 77.2178 SRR726540 5 dpf normal 76.5756 SRR516128 skin male and 5 month 74.5339 SRR516123 skin male and 3.5 year 73.3717 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 73.3404 SRR519722 4 dpf FETOH treatment 69.8 SRR527834 head normal 67.5961 SRR535852 larvae hoxb1b mut 66.5445 SRR1562530 liver normal 66.1049 SRR1565813 brain normal 65.722 SRR516126 skin male and 5 month 65.686 SRR372791 dome normal 65.0754 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 64.9529 SRR1565815 brain normal 62.9818 SRR1565817 brain normal 61.4389 SRR1565809 brain normal 61.1207 SRR535849 larvae normal 60.7464 SRR1565819 brain normal 59.6475 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 59.0025 SRR1565811 brain normal 58.9509 SRR1565807 brain normal 57.8862 SRR1565805 brain normal 57.6911 SRR1049814 256 cell normal 57.3033 SRR516122 skin male and 3.5 year 55.8698 SRR1167762 embryo ptpn6 morpholino 54.9682 SRR516132 skin male and 5 month 54.7195 SRR535850 larvae hoxb1b mut 54.2228 SRR535847 larvae normal 54.0263 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 53.5492 SRR516134 skin male and 5 month 51.8155 SRR516125 skin male and 3.5 year 50.4114 SRR1621206 embryo normal 48.8454 SRR535848 larvae hoxb1b mut 48.2648 SRR372798 28 hpf normal 46.093 SRR1534349 larvae DMSO vehicle 46.0244 SRR516131 skin male and 5 month 45.7145 SRR516133 skin male and 5 month 45.4498 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 45.205 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 44.1695 SRR535851 larvae normal 43.3982 SRR942764 embryo myd88-/- 43.215 SRR516135 skin male and 5 month 43.1473 SRR516124 skin male and 3.5 year 42.6673 SRR891511 brain normal 42.0789 SRR800037 egg normal 41.7697 SRR516129 skin male and 5 month 39.8227 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 38.5524 SRR776507 embryo normal 38.3447 SRR831692 embryo normal 37.439 SRR1167757 embryo mpeg1 morpholino and bacterial infection 35.3088 SRR1342217 embryo infection with Mycobacterium marinum 33.9918 SRR776508 embryo miR-146 knockdown 33.0688 SRR942769 embryo myd88+/+ 32.4357 SRR535890 larvae normal 31.8839 SRR1708343 embryo MUTAS 31.6362 SRR1028002 head normal 30.8939 SRR1167763 embryo ptpn6 morpholino and bacterial infection 28.1789 SRR372787 2-4 cell normal 27.8513 SRR372800 2 dpf normal 27.4092 SRR1534350 larvae 5 ug/l BDE47 treatment 26.6707 SRR1648856 brain normal 25.7651 SRR1167753 embryo bacterial infection 25.4827 SRR1562529 intestine and pancreas normal 24.3777 SRR1648855 brain normal 24.2518 SRR372789 1K cell normal 23.787 SRR1167756 embryo mpeg1 morpholino 23.3644 SRR776509 embryo Salmonella infected 22.1345 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 22.0283 SRR592698 pineal gland normal 21.0724 SRR1648854 brain normal 20.4538 SRR1167752 embryo normal 20.3498 SRR1048061 pineal gland dark 20.3258 SRR1028004 head normal 19.925 SRR1562531 muscle normal 19.4361 SRR1342216 embryo norml 19.1275 SRR801555 embryo RPS19 morpholino 16.6725 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 14.1899 SRR1562532 spleen normal 13.6206 SRR1534351 larvae 500 ug/l BDE47 treatment 13.2462 SRR1028003 head normal 13.1626 SRR592703 pineal gland normal 12.8088 SRR1048059 pineal gland light 12.0812 SRR1562533 testis normal 10.7149 SRR592702 pineal gland normal 10.5038 SRR1005529 embryo control morpholino 9.97897 SRR1299124 caudal fin Zero day time after treatment 9.97209 SRR801554 embryo control morpholino 9.96353 SRR592699 pineal gland normal 9.83873 SRR776510 embryo Salmonella infected and miR-146 knockdown 7.87223 SRR1299128 caudal fin Three days time after treatment 7.68336 SRR592700 pineal gland normal 7.3966199999999995 SRR1562528 eye normal 6.38258 ERR594418 retina transgenic flk1 and develop tumors 6.24326 ERR023143 swim bladder normal 5.98054 SRR748489 egg normal 5.97243 SRR1708345 embryo SIBAS 5.92861 SRR1342218 embryo marco morpholino 5.38287 SRR630463 5 dpf normal 4.70065 SRR372793 shield normal 4.46396 ERR594416 retina transgenic flk1 3.7928 SRR592701 pineal gland normal 3.54529 ERR023144 brain normal 3.12968 SRR630464 5 dpf injected epidermidis 2.3990299999999998 ERR594417 retina normal 2.37056 SRR1708344 embryo MUTPS 1.88848 SRR1005530 embryo RPL11 morpholino 1.81404 ERR023145 heart normal 1.68419 SRR1708346 embryo SIBPS 1.44839 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.43326 SRR748488 sperm normal 1.23611 SRR372802 5 dpf normal 0.7229270000000001 SRR1299129 caudal fin Seven days time after treatment 0.634905 SRR1299127 caudal fin Two days time after treatment 0.608645 SRR1299126 caudal fin One day time after treatment 0.579235 SRR1299125 caudal fin Half day time after treatment 0.22212800000000002