sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 31.351 SRR941753 posterior pectoral fin normal 27.7611 SRR941749 anterior pectoral fin normal 26.3855 SRR1299125 caudal fin Half day time after treatment 24.8487 SRR1299127 caudal fin Two days time after treatment 24.8197 SRR1299129 caudal fin Seven days time after treatment 23.7512 SRR1299126 caudal fin One day time after treatment 23.1333 SRR516123 skin male and 3.5 year 22.9938 SRR516121 skin male and 3.5 year 19.2668 SRR1299128 caudal fin Three days time after treatment 17.1648 SRR516133 skin male and 5 month 16.9005 SRR516125 skin male and 3.5 year 16.7085 SRR516134 skin male and 5 month 14.745999999999999 SRR516128 skin male and 5 month 13.8549 SRR516131 skin male and 5 month 13.6886 SRR516124 skin male and 3.5 year 13.2549 SRR516129 skin male and 5 month 12.6737 SRR516126 skin male and 5 month 11.3687 SRR516132 skin male and 5 month 10.7783 SRR516122 skin male and 3.5 year 10.0832 SRR516127 skin male and 5 month 8.75663 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 8.24042 SRR527834 head normal 8.07737 SRR891512 blood normal 8.02047 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.9484 SRR516130 skin male and 5 month 7.36963 SRR592701 pineal gland normal 6.5693 SRR592702 pineal gland normal 6.45939 SRR516135 skin male and 5 month 6.17035 SRR658537 bud Gata6 morphant 5.54826 SRR1205160 5dpf transgenic sqET20 and GFP+ 5.3398699999999995 SRR592703 pineal gland normal 5.23963 SRR658533 bud normal 5.20791 SRR658539 bud Gata5/6 morphant 5.0785 SRR592698 pineal gland normal 5.0780400000000006 SRR1562528 eye normal 4.137569999999999 SRR592700 pineal gland normal 4.035069999999999 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.02603 SRR1104059 heart kctd10 mut 3.8979199999999996 SRR1104058 heart normal 3.8584400000000003 SRR592699 pineal gland normal 3.83549 SRR658535 bud Gata5 morphant 3.73455 SRR658545 6 somite Gata6 morphant 3.65925 SRR519727 6 dpf FETOH treatment 3.6493300000000004 SRR610741 3 dpf express Ras 3.44958 SRR1028002 head normal 3.4068300000000002 SRR658547 6 somite Gata5/6 morphant 3.30334 SRR610742 3 dpf express NICD 3.26087 SRR726541 5 dpf infection with Mycobacterium marinum 3.20114 SRR1708344 embryo MUTPS 3.16951 SRR535848 larvae hoxb1b mut 2.93744 SRR1708343 embryo MUTAS 2.93627 SRR610740 3 dpf normal 2.92802 SRR1708346 embryo SIBPS 2.9100900000000003 SRR633516 larvae normal 2.85717 SRR065197 3 dpf U1C knockout 2.77609 SRR658541 6 somite normal 2.70655 SRR776508 embryo miR-146 knockdown 2.69375 SRR776507 embryo normal 2.6682799999999998 SRR1523211 embryo control morpholino 2.5782 SRR1342217 embryo infection with Mycobacterium marinum 2.5629299999999997 SRR519747 6 dpf VD3 treatment 2.55582 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.53516 SRR1167756 embryo mpeg1 morpholino 2.51411 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.50683 SRR1035978 13 hpf rx3-/- 2.49222 SRR519732 7 dpf FETOH treatment 2.49091 SRR535890 larvae normal 2.46953 SRR535852 larvae hoxb1b mut 2.45992 SRR1167752 embryo normal 2.44408 SRR1523214 embryo glut12 morpholino 2.43059 SRR831692 embryo normal 2.42262 SRR942769 embryo myd88+/+ 2.4135 SRR535847 larvae normal 2.37653 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.35793 SRR519752 7 dpf VD3 treatment 2.347 SRR519722 4 dpf FETOH treatment 2.33219 SRR535926 larvae normal 2.30987 SRR749515 24 hpf eif3ha morphant 2.30753 SRR797908 embryo normal 2.3061 SRR535850 larvae hoxb1b mut 2.29881 SRR535851 larvae normal 2.29798 SRR1028003 head normal 2.29522 SRR372800 2 dpf normal 2.27868 SRR535913 larvae krox mut 2.2490099999999997 SRR372796 bud normal 2.24329 SRR519737 2 dpf VD3 treatment 2.21368 SRR527833 5 dpf normal 2.1558900000000003 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.14838 SRR535849 larvae normal 2.1478099999999998 SRR1028004 head normal 2.1012 SRR519717 2 dpf FETOH treatment 2.08282 SRR658543 6 somite Gata5 morphan 2.0492 SRR797911 embryo prdm1-/- 2.04277 SRR1048061 pineal gland dark 1.96715 SRR1004789 larvae impdh2 morpholino 1.96459 SRR519742 4 dpf VD3 treatment 1.9641 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.94567 SRR1291414 5 dpi normal 1.9395900000000001 SRR797914 embryo pbx2/4-MO 1.9201599999999999 SRR527832 16-36 hpf normal 1.9004400000000001 SRR1534350 larvae 5 ug/l BDE47 treatment 1.88703 SRR372798 28 hpf normal 1.8568799999999999 SRR1562531 muscle normal 1.8304900000000002 SRR749514 24 hpf normal 1.8300599999999998 SRR535943 larvae vangl mut 1.81495 SRR1188148 embryo Control PBS 0.5 hpi 1.77217 SRR633544 larvae exposed to cold stress 1.7548400000000002 SRR038625 embryo traf6 morpholino 1.75249 SRR038627 embryo control morpholino 1.7334200000000002 SRR630464 5 dpf injected epidermidis 1.69377 SRR535986 larvae nhsl1b mut 1.62976 SRR1188156 embryo Control PBS 4 hpi 1.57751 SRR1004786 larvae control morpholino 1.56621 SRR1188152 embryo Insulin 0.5 hpi 1.56209 SRR942764 embryo myd88-/- 1.55656 SRR1188160 embryo Insulin 4 hpi 1.53738 SRR1534349 larvae DMSO vehicle 1.53257 SRR726542 5 dpf infection with control 1.52296 SRR726540 5 dpf normal 1.47881 SRR633550 larvae exposed to hypoxia stress 1.4732100000000001 SRR1291417 5 dpi injected marinum 1.36477 SRR038624 embryo traf6 morpholino and bacterial infection 1.3590799999999998 SRR1004788 larvae impdh1b morpholino 1.3263200000000002 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.3262200000000002 SRR1035984 13 hpf normal 1.3150899999999999 SRR1167753 embryo bacterial infection 1.30596 SRR372793 shield normal 1.29942 SRR1534351 larvae 500 ug/l BDE47 treatment 1.17383 SRR630463 5 dpf normal 1.1728299999999998 SRR372802 5 dpf normal 1.13984 SRR535978 larvae normal 1.12551 SRR527835 tail normal 1.0713 SRR1708345 embryo SIBAS 1.0647799999999998 SRR1004785 larvae normal 1.0432 SRR065196 3 dpf normal 1.03862 SRR1004787 larvae impdh1a morpholino 0.9872040000000001 SRR1005530 embryo RPL11 morpholino 0.9624090000000001 SRR1648854 brain normal 0.9522280000000001 SRR527840 24hpf normal 0.927478 SRR1342216 embryo norml 0.920283 SRR527836 24hpf normal 0.851334 SRR038626 embryo control morpholino and bacterial infection 0.844253 SRR748489 egg normal 0.783045 SRR1342218 embryo marco morpholino 0.7705770000000001 SRR700537 heart Gata4 morpholino 0.729252 SRR801555 embryo RPS19 morpholino 0.66293 ERR023145 heart normal 0.6250979999999999 SRR801556 embryo RPS19 and p53 morpholino 0.587908 SRR1648856 brain normal 0.574101 SRR891495 heart normal 0.5336989999999999 ERR023146 head kidney normal 0.433386 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.404955 SRR1562533 testis normal 0.346476 SRR1048059 pineal gland light 0.311187 SRR1005529 embryo control morpholino 0.29641999999999996 SRR801554 embryo control morpholino 0.296062 SRR514028 retina control morpholino 0.285501 SRR957180 heart 7 days after heart tip amputation 0.273129 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.195159 SRR1035237 liver transgenic UHRF1 0.147786 ERR023143 swim bladder normal 0.147329 SRR1562529 intestine and pancreas normal 0.141147 SRR1647683 spleen SVCV treatment 0.12333699999999999 SRR776509 embryo Salmonella infected 0.11380699999999999 SRR594769 blood normal 0.111456 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.111279 SRR891510 muscle normal 0.104059 SRR1647682 spleen normal 0.103182 SRR1049814 256 cell normal 0.10265 SRR800037 egg normal 0.0925435 SRR1565815 brain normal 0.0850214 SRR748488 sperm normal 0.0842975 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.0789005 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.0728234 SRR1647679 head kidney normal 0.07247 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.0724033 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.0638072 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0629446 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.057702199999999995 SRR800046 sphere stage 5azaCyD treatment 0.05440319999999999 SRR1039573 gastrointestinal diet 0.75 NPM 0.0509468 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.0509434 SRR1021213 sphere stage normal 0.0467279 SRR1035239 liver transgenic mCherry control 0.0380926 ERR023144 brain normal 0.0334508 SRR1565807 brain normal 0.033410699999999995 SRR1565811 brain normal 0.0305057 SRR1205154 5dpf transgenic sqET20 0.029961200000000004 SRR800045 muscle normal 0.029749099999999997 SRR372791 dome normal 0.0275536 SRR1167762 embryo ptpn6 morpholino 0.026256400000000003 SRR1565813 brain normal 0.0247019 SRR1021215 sphere stage Mzeomesa 0.0239231 SRR1562532 spleen normal 0.0223264 ERR594416 retina transgenic flk1 0.021690200000000003 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.020373099999999998 SRR1565819 brain normal 0.020065799999999998 SRR372789 1K cell normal 0.017980700000000002 SRR700534 heart control morpholino 0.0171918 SRR1647681 head kidney SVCV treatment 0.0166375 SRR1039571 gastrointestinal diet 0.1 NPM 0.0165678 SRR527844 24hpf normal 0.016353 SRR594771 endothelium normal 0.015259299999999998 SRR1647684 spleen SVCV treatment 0.014088900000000001 SRR748490 1 kcell normal 0.013249 SRR957181 heart normal 0.0124706 SRR748491 germ ring normal 0.0123961 SRR1569491 embryo normal 0.0105056 SRR1648855 brain normal 0.0101429 SRR514030 retina id2a morpholino 0.00963597 SRR1647680 head kidney SVCV treatment 0.008903 SRR1565805 brain normal 0.00786923 ERR594418 retina transgenic flk1 and develop tumors 0.00764539 SRR1569495 embryo normal 0.00660729 SRR1565809 brain normal 0.00497721 SRR1565817 brain normal 0.00463872 SRR372787 2-4 cell normal 0.00254004 SRR1621206 embryo normal 1.79653e-05