sample tissue condition fpkm SRR519737 2 dpf VD3 treatment 91.493 SRR519717 2 dpf FETOH treatment 78.7452 SRR610742 3 dpf express NICD 63.5382 SRR535847 larvae normal 45.9119 SRR610740 3 dpf normal 45.5268 SRR535849 larvae normal 39.7499 SRR1188160 embryo Insulin 4 hpi 37.6621 SRR519742 4 dpf VD3 treatment 36.4115 SRR519722 4 dpf FETOH treatment 36.1276 SRR535851 larvae normal 35.6283 SRR1205160 5dpf transgenic sqET20 and GFP+ 34.3297 SRR1523211 embryo control morpholino 34.2181 SRR372800 2 dpf normal 34.1352 SRR1188148 embryo Control PBS 0.5 hpi 33.7944 SRR610741 3 dpf express Ras 33.6352 SRR535848 larvae hoxb1b mut 32.7106 SRR1523214 embryo glut12 morpholino 32.3226 SRR1188156 embryo Control PBS 4 hpi 30.8244 SRR372798 28 hpf normal 30.6897 SRR1188152 embryo Insulin 0.5 hpi 29.9353 SRR776508 embryo miR-146 knockdown 27.3859 SRR831692 embryo normal 26.701999999999998 SRR1104058 heart normal 24.6137 SRR726541 5 dpf infection with Mycobacterium marinum 24.0456 SRR776509 embryo Salmonella infected 23.7808 SRR372802 5 dpf normal 23.399 SRR535852 larvae hoxb1b mut 23.3741 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 22.248 SRR519727 6 dpf FETOH treatment 21.5993 SRR038625 embryo traf6 morpholino 20.9635 SRR776510 embryo Salmonella infected and miR-146 knockdown 20.912 SRR527836 24hpf normal 20.8902 SRR038624 embryo traf6 morpholino and bacterial infection 20.5754 SRR726542 5 dpf infection with control 19.952 ERR023143 swim bladder normal 19.9388 SRR519747 6 dpf VD3 treatment 19.7657 SRR038627 embryo control morpholino 18.9401 SRR535890 larvae normal 18.6381 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 18.6115 SRR065197 3 dpf U1C knockout 17.2786 SRR535850 larvae hoxb1b mut 16.8838 SRR535913 larvae krox mut 16.7317 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 16.5519 SRR519732 7 dpf FETOH treatment 16.2739 SRR038626 embryo control morpholino and bacterial infection 15.8884 SRR535926 larvae normal 15.0855 SRR1167752 embryo normal 14.2559 SRR527844 24hpf normal 14.2441 SRR519752 7 dpf VD3 treatment 13.3067 SRR1104059 heart kctd10 mut 13.1938 SRR535943 larvae vangl mut 13.1067 SRR1167756 embryo mpeg1 morpholino 13.0063 SRR726540 5 dpf normal 12.0354 SRR527840 24hpf normal 11.8838 SRR1342216 embryo norml 11.8771 SRR1028003 head normal 11.382 SRR065196 3 dpf normal 11.0359 SRR1167757 embryo mpeg1 morpholino and bacterial infection 10.6875 SRR1167753 embryo bacterial infection 10.1329 SRR1004786 larvae control morpholino 9.636560000000001 SRR633544 larvae exposed to cold stress 9.44758 SRR776507 embryo normal 9.42633 SRR1004787 larvae impdh1a morpholino 9.42295 SRR1342218 embryo marco morpholino 9.2213 SRR1291414 5 dpi normal 9.13193 SRR633516 larvae normal 8.990210000000001 SRR1167762 embryo ptpn6 morpholino 8.9749 SRR941753 posterior pectoral fin normal 8.86994 SRR1569495 embryo normal 8.564010000000001 SRR633550 larvae exposed to hypoxia stress 8.546489999999999 SRR942769 embryo myd88+/+ 8.491769999999999 SRR941749 anterior pectoral fin normal 8.41344 SRR1028004 head normal 8.35556 SRR1167763 embryo ptpn6 morpholino and bacterial infection 8.222389999999999 SRR1004788 larvae impdh1b morpholino 8.12981 SRR1342217 embryo infection with Mycobacterium marinum 7.7569 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.638789999999999 SRR942764 embryo myd88-/- 7.61217 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.53396 SRR516131 skin male and 5 month 7.253889999999999 SRR1004785 larvae normal 7.039739999999999 SRR516129 skin male and 5 month 6.90517 SRR1004789 larvae impdh2 morpholino 6.77568 SRR527832 16-36 hpf normal 6.76709 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.12194 SRR592703 pineal gland normal 5.9004199999999996 SRR749514 24 hpf normal 5.66141 SRR749515 24 hpf eif3ha morphant 5.301740000000001 SRR1708346 embryo SIBPS 5.25676 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5.24343 SRR658543 6 somite Gata5 morphan 5.21391 SRR516135 skin male and 5 month 5.14849 SRR658545 6 somite Gata6 morphant 4.6858 SRR658547 6 somite Gata5/6 morphant 4.66341 SRR592699 pineal gland normal 4.64206 SRR700537 heart Gata4 morpholino 4.58591 SRR527833 5 dpf normal 4.58426 SRR658541 6 somite normal 4.543880000000001 SRR516128 skin male and 5 month 4.4711300000000005 SRR592701 pineal gland normal 4.25957 SRR592700 pineal gland normal 4.179790000000001 SRR1562531 muscle normal 4.16749 SRR1205154 5dpf transgenic sqET20 4.11333 SRR630463 5 dpf normal 4.10124 SRR516134 skin male and 5 month 4.076919999999999 SRR516122 skin male and 3.5 year 4.04645 SRR516127 skin male and 5 month 3.99776 SRR594771 endothelium normal 3.96864 SRR1028002 head normal 3.88985 SRR891510 muscle normal 3.85226 SRR594769 blood normal 3.8191300000000004 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.67591 SRR516130 skin male and 5 month 3.4607699999999997 SRR630464 5 dpf injected epidermidis 3.43871 ERR023144 brain normal 3.3784 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.36323 SRR797908 embryo normal 3.34268 SRR516126 skin male and 5 month 3.24201 SRR1291417 5 dpi injected marinum 3.18962 SRR801556 embryo RPS19 and p53 morpholino 2.9965200000000003 SRR1005530 embryo RPL11 morpholino 2.98715 SRR516121 skin male and 3.5 year 2.96746 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.49549 SRR797914 embryo pbx2/4-MO 2.4323200000000003 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.3631599999999997 ERR023146 head kidney normal 2.33637 SRR700534 heart control morpholino 2.3054099999999997 SRR797911 embryo prdm1-/- 2.18306 SRR516133 skin male and 5 month 2.17282 SRR658537 bud Gata6 morphant 2.1655599999999997 SRR1708344 embryo MUTPS 2.05171 SRR516124 skin male and 3.5 year 2.01011 SRR1569491 embryo normal 1.9658400000000003 SRR592698 pineal gland normal 1.90782 SRR1534350 larvae 5 ug/l BDE47 treatment 1.87868 SRR1299128 caudal fin Three days time after treatment 1.76626 SRR1708343 embryo MUTAS 1.7138 SRR1299129 caudal fin Seven days time after treatment 1.66045 SRR1648854 brain normal 1.6601400000000002 SRR658535 bud Gata5 morphant 1.65378 SRR1005529 embryo control morpholino 1.61858 SRR801554 embryo control morpholino 1.61615 SRR516123 skin male and 3.5 year 1.60027 SRR516132 skin male and 5 month 1.59626 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.48864 SRR1299126 caudal fin One day time after treatment 1.45128 SRR800045 muscle normal 1.43973 SRR514030 retina id2a morpholino 1.2723 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.25671 SRR372796 bud normal 1.1799 SRR516125 skin male and 3.5 year 1.1716 SRR1035237 liver transgenic UHRF1 1.121 SRR658533 bud normal 1.05866 SRR1299127 caudal fin Two days time after treatment 1.02662 SRR658539 bud Gata5/6 morphant 0.987756 SRR1299124 caudal fin Zero day time after treatment 0.9466379999999999 SRR1534349 larvae DMSO vehicle 0.930818 SRR1708345 embryo SIBAS 0.9300870000000001 SRR1648856 brain normal 0.929607 SRR535978 larvae normal 0.9064469999999999 SRR592702 pineal gland normal 0.825896 SRR514028 retina control morpholino 0.8237680000000001 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.797977 SRR1035984 13 hpf normal 0.782126 SRR1035978 13 hpf rx3-/- 0.727344 SRR1562528 eye normal 0.682268 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.647701 SRR748491 germ ring normal 0.583374 SRR1048059 pineal gland light 0.566905 SRR1035239 liver transgenic mCherry control 0.488237 SRR748489 egg normal 0.47434799999999994 SRR535986 larvae nhsl1b mut 0.379687 SRR1565809 brain normal 0.363664 SRR1048061 pineal gland dark 0.358625 SRR1565807 brain normal 0.342012 SRR891511 brain normal 0.315933 SRR1534351 larvae 500 ug/l BDE47 treatment 0.294682 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.294225 SRR1565811 brain normal 0.292442 SRR1565815 brain normal 0.284528 SRR748490 1 kcell normal 0.252189 SRR957181 heart normal 0.25048000000000004 ERR594418 retina transgenic flk1 and develop tumors 0.243333 SRR1299125 caudal fin Half day time after treatment 0.22351 SRR1565813 brain normal 0.182936 SRR1565805 brain normal 0.11814300000000001 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.110581 SRR372787 2-4 cell normal 0.110248 SRR1562533 testis normal 0.105431 SRR1565819 brain normal 0.08731889999999999 SRR1039571 gastrointestinal diet 0.1 NPM 0.0866584 ERR594417 retina normal 0.08453560000000002 SRR1621206 embryo normal 0.056600199999999996 ERR594416 retina transgenic flk1 0.0319034