LncRNA Gene

ZFLNCG00119

Basic Information

Chromesome: chr1

Start: 8230178

End: 8231605

Transcript: ZFLNCT00179

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR886455 128 cell 4-thio-UTP metabolic labeling 350.42
SRR886457 512 cell 4-thio-UTP metabolic labeling 266.30
SRR886456 256 cell 4-thio-UTP metabolic labeling 234.22
SRR527835 tail normal 168.01
SRR1035981 13 hpf rx3+/+ or rx3+/- 86.96
SRR1035978 13 hpf rx3-/- 84.53
SRR658543 6 somite Gata5 morphan 73.37
SRR658533 bud normal 72.34
SRR594769 blood normal 69.70
SRR658535 bud Gata5 morphant 69.00
Express in tissues
Correlated coding gene Download
gene correlation coefficent
lamtor1 0.66
zgc:174651 0.66
acbd3 0.60
helq 0.59
si:dkey-20i20.2 0.56
LOC101886556 0.56
ppp6r3 0.56
si:dkey-159f12.2 0.55
LOC100537517 0.54
fgf17 0.53
Gene Ontology Download
GO P value
GO:0032439 1.14e-03
GO:0032008 4.54e-03
GO:0001919 5.67e-03
GO:0042632 7.93e-03
GO:0055092 7.93e-03
GO:1903225 9.06e-03
GO:0042664 9.06e-03
GO:2000542 1.24e-02
GO:0080171 1.24e-02
GO:0009996 1.24e-02
GO:0032044 2.27e-03
GO:0071986 5.67e-03
GO:0005622 1.19e-02
GO:0031902 1.36e-02
GO:0045121 2.03e-02
GO:0098857 2.03e-02
GO:0008023 2.36e-02
GO:0010008 4.56e-02
GO:0003676 6.59e-03
GO:0043167 9.80e-03
GO:0001871 1.02e-02
GO:0030247 1.02e-02
GO:0005488 1.24e-02
GO:0046872 1.49e-02
GO:0043169 1.66e-02
GO:0000062 2.14e-02
GO:0005044 3.25e-02
GO:0038024 3.47e-02
KEGG Pathway Download
KO P value
ko04810 3.91e-03
ko04015 4.34e-03
ko04014 4.37e-03
ko04010 5.76e-03
ko05200 1.33e-02
ko04011 2.19e-02
ko05130 3.17e-02
ko04370 3.17e-02
ko05131 3.38e-02
ko05212 3.42e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT00179 NONMMUT051960; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG00119
AATTGTTGTTCAAACGAACTGCGTCTAAACGTCGCTTTTGTCGTCAAATTTTAGTGTAATGCGGATTTTA
ACATTTAAACCCTCACCAAAACAATTATTTAATTGTTGTAAACTTATCGCAACCATGTATTTGGCGTATT
GTTAACGTTAACATTTTATCCAGTTTCACTAAACGTAACGTTACTGTGATTGTGTACAGTACAACCATAA
AAACATGTTTATTGAACTTGATTATTTGTAAATTGTGAGCCCTCGTATAGTTGTAGTAAGTAAAATTATT
ATTCGTTTTGGGAAACTAAATCCTTTAAGAGAGAAATTGTTTTATTCTACAAGAGACCCGTTACGTTAAA
TAATTAAATTTTATCATTTTAAATCCTTTTCACAGGGTGTCTTAAATTACAAACTAAATTTTGGACCTTA
AAAGTCTCAAATTTGCTAATTTATGGTCTTGTTGGTCTTAAATTTTTAATTGTTCTTAAGTTTCCTATGC
CCATTTAAAGTTAACCACATGGGCAAAGACCTACCCAATCAGCAGCAACAGAACTCTATAAAACGTTTAA
CTAAATATAATAACTATTTACCTATATGGTTTTATTTTCCTTTGCGTAAAATTTATTTATTTTAAGGCTT
CTTAGCATTAAGCCCATTTGTGAGTCTGAAATTTCGTTTATAATGGTCTTAAGAGTCTTAGATTTGACGA
GACCTGCAGAGACCCTGTATTCAGTATTACAATATGGTCTATTCCTTTTATTTTTTTTATAAATTAGTTT
TTGTTTGTTTTCTGCTGTTAACTTTTTTCCCCCCTCTTCCAGTCTCTCCTTGAATTGCACAAAAGGAGGA
AGGCAGTGACTGAGCCTGAGGCCCGATACTTCATGCGCCAGACTATTCAGGGTGTTCAGTACTTGCACAA
CAACAGAGTCATTCACCGTGATCTCAAACTTGGGAATCTGTTCCTCAATGATGACATGGATGTGAAGATC
GGTAAGCACACACAGATTTTTACAATTTTTATACCTGACTTTTTATATATACTTAAAATTAAGGCTATTT
GTTCTCCTCTTTGTAGGTGACTTTGGTTTAGCCACTAAGATTGAGTTTGATGGGGAGCGAAAGAAGACCC
TTTGTGGCACTCCAAACTACATTGCTCCTGAGGTGCTCTGCAAGAAAGGCCACAGCTTTGAAGTTGACAT
TTGGTCACTAGGATGCATTCTGTGAGTACCTTGTTGAATTAATTGCACAATGATGTTTTCACAATGTTAT
GTTCTCTGATGGTGTTTCATTCTTGCTAAAGCTTTAATTTTGTTTAACATGTACTGTACTCGCAGTAATT
TCTTTTCTTTATCAGATACACACTGCTGGTTGGAAAGCCTCCATTTGAGACATCCTGTCTGAAAGAGACC
TACATTAGGATTAAGAAGAATGAGTAC