LncRNA Gene

ZFLNCG00017

Basic Information

Chromesome: chr1

Start: 571434

End: 573940

Transcript: ZFLNCT00021

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR886457 512 cell 4-thio-UTP metabolic labeling 6.35
SRR1004786 larvae control morpholino 5.92
SRR519737 2 dpf VD3 treatment 5.87
SRR1004785 larvae normal 5.79
SRR519717 2 dpf FETOH treatment 5.66
SRR1004787 larvae impdh1a morpholino 5.51
SRR941749 anterior pectoral fin normal 4.84
SRR941753 posterior pectoral fin normal 4.76
SRR372796 bud normal 4.58
SRR797911 embryo prdm1-/- 4.48
Express in tissues
Correlated coding gene Download
gene correlation coefficent
tmem39a 0.74
prpf39 0.71
nup133 0.69
terfa 0.69
tmed1b 0.69
kpnb1 0.69
fam53b 0.68
pggt1b 0.67
sapcd2 0.67
nup54 0.67
Gene Ontology Download
GO P value
GO:0001731 4.15e-12
GO:0006413 1.17e-11
GO:0071826 2.98e-11
GO:0034622 3.40e-11
GO:0022618 4.48e-11
GO:0006396 5.16e-11
GO:0006412 1.21e-10
GO:0065003 1.27e-10
GO:0006725 1.35e-10
GO:0016070 1.41e-10
GO:0033290 4.15e-12
GO:0070993 4.15e-12
GO:0000502 1.17e-11
GO:0005681 3.47e-11
GO:0016282 3.59e-11
GO:0005839 4.41e-11
GO:0030529 6.76e-11
GO:1990904 6.76e-11
GO:0005852 8.72e-11
GO:0044428 8.98e-11
GO:0003743 1.17e-11
GO:0004298 4.41e-11
GO:0070003 4.41e-11
GO:0003723 8.79e-11
GO:1901363 2.30e-10
GO:0003676 2.48e-10
GO:0097159 2.61e-10
GO:0036094 3.75e-10
GO:0000166 4.22e-10
GO:1901265 4.22e-10
KEGG Pathway Download
KO P value
ko03013 1.48e-25
ko03050 2.36e-13
ko03040 1.51e-12
ko03008 8.18e-07
ko04141 3.20e-06
ko03015 3.01e-05
ko00970 1.64e-04
ko03018 3.45e-03
ko03010 7.52e-03
ko03030 1.19e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT00021 NONMMUT112577; Direct blastn
ZFLNCT00021 ENSMUST00000168897; NONMMUT099695; NONMMUT026571; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG00017
TCGGTTTGCCACGTCGGTCTGTAACTGCGGCGCGAGGAACTTCAGCAACTTTGTGTTTTGCGTTCTGAGG
CCGTAAACAACAAACAAACAACCGAGTAAACAAACAACGAGCTCCGGCGCAGACCCGCGGGCAGAGTGAG
GAGCTCCGCCGCGCAGCAGATGCAGAGAGCGGCGTGTGGAGGAGCTGATGCCCGCTGATGCTGCTCCATG
ATCGGTCAGAACCAGCGCTGAACACCACACACATACACACACACACACATACACACACACACACATACAC
ACACACACACACACACACACACACACGCGAGTAGATTTCGTCCGTTATTGAGTGAGCAGCGCGGTGTTGT
TTCCTGTTTGTGTGTGAACAGCGCGCTGCTGCTGCAGGTGGGTAACGGTAACGGTCTGGTCAGGGTGTAC
CGATCACCGGCGGTCCGTTACTCGGCTAGCGCTGGTCATGAGGGGTTCAGTTCGCGCAGTTTCTCCATCA
CTCTCCGGGTTTCTTCAACTTCCTCTTTTAATCATAAACTGATGATGATGAAGAGACTCTGCTCTGACCT
CTGACCCCGCCGTGTGTCACTCATAGCTCAGATTTGATCAATAAAGTGTCCAGAATCCTCTAGAAGAGTT
CAATATGTGCTGACTAGCATTAGAAATACTTAAAAGAATGAGAAATAAGCAGACCCAGCGTGTGTGTGTG
TGTGTGTGTGTGTTCAGGCTATTGACGTCTCACACTCTTCATTTCCATGTGGTTTTTGTAAAGCAGGTAA
GCAGCAGTGAGGCTGTAGAGTGTGTGTGTGTGTGTGTGTGTGTGTTAGCCTGTCCAGCGTCAGAACAGAG
ATCTGACACGAGTATAGCCTGATGAAGCAGCGCATGGCTTCAGTCTCACACCGCTGTGGTCATGAGTGTT
CAGGTAAGAGTGTGTGTGTGTGTGTGTGTGTGATTTACTCCTCGTGTGATTTCTGCAGGAGCCTCTTAGG
ATGATGAAGACCGCAACTCCCATGATTCCACACTGTCATTTGCTTTGTTTGTTGTGTATATGCGGAGGAA
ATAACACACTGTTTAATATATATATATATATGTGTGTGTGTGTATGTGTGTGTGTGTTTGTGCAGTGTCC
GCGGCGTGAGGTCGAGGGCTCCGAGATGCCCGGGGGCCGCAGGGGCCCCAGTAGACAGCAGCTGAGCCGC
TCCGCGCTGCCGTCGCTGCAGACACTGGTGGGCGGCGGCCTGAGCAATGGGGCGGGGCTTCGATGCAGGT
GAGCATCACTTAAGCCGCCTTTCCACTGCACACGACATCTGGACTCGACTGTCAGAACTCGCCCGCTTGT
GGCGGTCGCTCAGTATTTCAGTGCTGCCGTGCTGCATGGCAGAGGAGCTGATCTCACCGTCACCCAGTGC
TGGAGCAGGAGCGTCACTCTCCCCGAGCCCAGCACGGCGCAATGAACACACACACACACACACACACACA
CACACACACACAGACCTGCTTAGACAACACTGAGTACATCACATCCGGCCAGTCACAGCGGTCCAAACTC
TTCAACAGATCCGCAGCTCAAACCAGATCAGAACACCACACAGCTCCCGGACCGCTCTCCACTCATAATG
AAGAACTTCCGGCCTGACACATGTCGTGTGCAGTGAAAACAAGGCCTCTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGAGTGACAATAAACACACTCTGCTGAACTGCTGCTCGCTGTCGGAGCGACT
CACTTTGACTATCAGACACAGATCTGCTGTTTCCTGCTCCGCCACTGAGAGAAGCGCTGTGTGTGTGCGT
GTGTGTGTGTGTGTGTGTGCGCAGGAGCAGCAGTGCGGTGGGTCTGTCAGCTCCGCCCCTCACCGCCCTC
ATCACCCCTGAGCCGGTCCGTCACTCCCGCATCCCGGATCTCCCTCTGGACAGTAACCTGCTGTTCGAGA
CGCTGCTGCTCCTCTACCTGCTGGTGGCGCTGTTGGTCCAGTACATCAACATCTACAGGACGGTGTGGTG
GTCCTCCTACAGCCAGCCCACCGCCTCCACGTCACTGGTACACACACACACACACACACTATTATTACTG
TACTGCGGGCCTGACCCCAGCCTCGCCTCTTCAGTGAACACAGGAGACGTCTCGCAGTATGTTCACGCTG
CTCTGTGCTGTTGGCAGGGGTCTGACAGAACCGGTTCATGTGTTCACCTACTTCTGTAGCTGGACCTGTG
TGTGTGTGTGTGTGTGTGTGAGCTGATGGTGTGTTTGTTTTCTGTGTAGAACTTCCACCTGATGGACGCT
CACCTGGCCGTGTTCATCGCAGTGATGCTGTCCCGCAGGCTGGTGTGGACGCTGCTGTCGGAGGTGTGTG
TGTGTGATGCGTGTTTCTCCTGTGTGTGTGTGTGTGTTTGTGTGCATGTGTGATGAGTGTCTCTCCTCTG
TGTTCAGGTGTGTGTGGCGTGTCCCGCGTCTCCGCTGTGCTACGTGCTCCTGCTGG